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Publications

by Todd R Johnson last modified 2009-08-11 16:42

In Press 

  1. Bernstam, E., Smith, J. W., & Johnson, T. R. (in press) What is biomedical informatics? Journal of Biomedical Informatics. 

  2. Tang, Z., Zhang, J. Thomas, E.J., Brixey, J., Johnson, T.R. (in press) Incorporating Usability Evaluation in Medical Device Purchasing for Improved Patient Safety. Biomedical Instrumentation & Technology.
  3. Nahm, M., White, L, Johnson, C., Johnson, T, Zhang, J. (in press). Additive Theory of Error Generation and Correction Derived from & Applied to Clinical Research Data Management. Information Quality Industry Symposium (IQIS) July 15-17, 2009, Cambridge Massachusetts
  4. Saleem JJ, Russ AL, Sanderson P, Johnson TR, Zhang J, Sittig DF. (in press) Current challenges and opportunities for better integration of human factors research with development of clinical information systems. 2009 IMIA Yearbook of Medical Informatics.


Peer Reviewed Publications

  1. Brixey, J. J., Zhang, J., Johnson, T. R., & Turley, J. P. (2009). Legibility of a Volumetric Infusion Pump in a Shock Trauma Intensive Care Unit. The Joint Commission Journal on Quality and Patient Safety, 35(4), 229-235.
  2. Brixey, J. J., Tang, Z., Robinson, D. J., Johnson, C. W., Johnson, T. R., Turley, J. P., et al. (2008). Interruptions in a level one trauma center: a case study. International journal of medical informatics, 77(4), 235-41. doi: S1386-5056(07)00089-5.
  3. Brixey, J. J., Robinson, D. J., Johnson, C. W., Johnson, T. R., Turley, J. P., & Zhang, J. (2007). A concept analysis of the phenomenon interruption. ANS. Advances in nursing science, 30(1), E26-42. doi: 00012272-200701000-00012.
  4. Johnson, T. R., Tang, X., Graham, M. J., Brixey, J., Turley, J. P., Zhang, J., et al. (2007). Attitudes toward medical device use errors and the prevention of adverse events. Joint Commission journal on quality and patient safety / Joint Commission Resources, 33(11), 689-94. doi: 18074717.
  5. Brixey J, Robinson D, Johnson C, Johnson T, Turley J, Patel V, et al. Towards a hybrid method to categorize interruptions and activities in healthcare. International Journal of Medical Informatics. 2007;76(11-12):812-20.
  6. Bernstam, E.V., Pancheri, K.K., Johnson, C.M., Johnson, T.R., Thomas, E.J., & Turley, J.P. (2007). Reasons for after-hours calls by hospital floor nurses to on-call physicians. Joint Commission journal on quality and patient safety / Joint Commission Resources, 33(6), 342-9.
  7. Tang, Z., Weavind, L., Mazabob, J., Thomas, E. J., Chu-Weininger, M. Y. L., & Johnson, T. R. (2007). Workflow in intensive care unit remote monitoring: A time-and-motion study. Critical care medicine, 35(9), 2057-63. doi: 17855819.
  8. Smith-Akin, K.A., McLane, S., Craig, T.M., & Johnson, T.R. (2006). Application of cognitive engineering principles to the redesign of a dichotomous identification key for parasitology. AMIA Annual Symposium proceedings / AMIA Symposium. AMIA Symposium, 739-43.
  9. Tang, Z, Johnson, TR, Tindall, RD, and Zhang, J (2006). Applying heuristic evaluation to improve the usability of a telemedicine system. Telemed J E Health 12(1):24-34.
  10. Turley, JP, Brixey, JJ, Johnson, TR, Mokkarala, P, and Zhang, j (2006). Comprehensive Medical Error Ontology for the Codification of Published Literature. Cognitive Studies 13(1):6-16.
  11. Turley, JP, Johnson, TR, Smith, DP, Zhang, J, and Brixey, JJ (2006). Operating manual-based usability evaluation of medical devices: an effective patient safety screening method. Jt Comm J Qual Patient Saf 32(4):214-20.
  12. Wang, H, Johnson, TR, and Zhang, J (2006). The order effect in human abductive reasoning: An empirical and computational study. Journal of Experimental and Theoretical Artificial Intelligence 18(2):215-247.
  13. Wang, H, Johnson, TR, and Zhang, J (2006). A hybrid system of abductive tactical decision making. Int. J. Hybrid Intell. Syst. 3(1):23-33.
  14. Chu-Weininger, M. Y. L., Johnson, T., Tang, Z., & Thomas, E. (2006). The eICU® as a Clinical Information System: Interface Design and Information Representation. In AMIA Spring Congress Proc.
  15. Johnson, T. R., Zhang, J., Patel, V. L., Keselman, A., Tang, X., Brixey, J., Paige, D., Turley, J. P. (2005). The role of patient safety in the device purchasing process. In K. Henriksen, J. B. Battles, E. Marks & D. I. Lewin (Eds.), Advances in Patient Safety: From Research to Implementation (pp. 341-352). Rockville, MD: Agency for Healthcare Research and Quality.
  16. Zhang, J., Patel, V. L., Johnson, T. R., & Turley, J. P. (2005). Evaluating and predicting patient safety in medical device use. In K. Henriksen, J. B. Battles, E. Marks & D. I. Lewin (Eds.), Advances in Patient Safety: From Research to Implementation (pp. 323-336). Rockville, MD: Agency for Healthcare Research and Quality.
  17. Chen, J, Flaitz, C, and Johnson, T (2005). Comparison of accuracy captured by different controlled languages in oral pathology diagnoses. AMIA Annu Symp Proc:918.
  18. Walji, M, Johnson-Throop, K, Johnson, T, Bernstam, E, and Zhang, J (2005). Persuasive email messages for patient communication. AMIA Annu Symp Proc:1148.
  19. Brixey, J. J., Robinson, D. J., Tang, Z., Johnson, T. R., Turley, J. P., & Zhang, J. (2005).  Interruptions in workflow for RNs in a level one trauma center.  Proceedings of AMIA 2005.
  20. Wang, H., Sun, Y., Johnson, T. R., & Yuan, Y. (2005). Prioritized Spatial Updating in the Intrinsic Frame of Reference. Spatial Cognition and Computation, 5(1), 89-113.
  21. Wang, H, Johnson, TR, Sun, Y, and Zhang, J (2005). Object location memory: the interplay of multiple representations. Mem Cognit 33(7):1147-59.
  22. Zhang, J., Patel, V. L., Johnson, T. R., & Turley, J. P. (2005). Health informatics and medical error. In Business Briefing: US Healthcare Strategies 2005 (pp. 34-35): Touch Briefings.
  23. Laxmisan, A., Malhotra, S., Keselman, A., Johnson, T. R., & Patel, V. L. (2005). Decisions about critical events in device-related scenarios as a function of expertise. Journal of Biomedical Informatics, 38, 200-212.
  24. Johnson, C. M., Johnson, T. R., & Zhang, J. (2005). A user-centered framework for redesigning health care interfaces. Journal of Biomedical Informatics, 38, 75-87.
  25. Keselman, A., Patel, V. L., Zhang, J., & Johnson, T. (2004). Institutional decision making to select patient care devices: an analysis to identify threats to patient safety. MEDINFO 2004. (Nominated for the Diane Forsythe award.)
  26. Graham, M. J., Kubose, T. K., Jordan, D., Zhang, J., Johnson, T. R., & Patel, V. L. (2004). Heuristic evaluation of infusion pumps: implications for patient safety in intensive care units. International Journal of Medical Informatics, 73, 771-779.
  27. Sun, Y., Wang, H., & Johnson, T. R. (2004). Spatial Updating in Intrinsic Frames of Reference. Proceedings of the Annual Meeting of the Cognitive Science Society, 1285-1290.
  28. Zhang, J., Patel, V. L., Johnson, T. R., & Shortliffe, E. H. (2004). A cognitive taxonomy of medical errors. Journal of Biomedical Informatics, 37(3), 193-204.
  29. Wang, H., Fan, J., & Johnson, T. R. (2004). A symbolic model of human attentional networks. Cognitive Systems Research, 5, 119-134.
  30. Johnson, T. R., Zhang, J., Tang, Z., Johnson, C. M., & Turley, J. P. (2004). Assessing Informatics Students’ Satisfaction with a Web-based Courseware System. International Journal of Medical Informatics (73), 181-187.
  31. Tang, Z., Zhang, J., Johnson, T. R., Bernstam, E., & Tindall, D. (2004). Integrating task analysis in software usability evaluation: A case study. Proceedings of the Human Factors and Ergonomics Society 48th Annual Meeting.
  32. Wang, H., Johnson, T. R., & Zhang, J. (2003). A multilevel approach to cognitive modeling (Commentary on Anderson & Lebiere - The Newell Test for a Theory of Cognition). Behavioral and Brain Sciences, 26(5), 626-627.
  33. Zhang, J., Johnson, T. R., Patel, V. L., Paige, D. L., & Kubose, T. (2003). Using usability heuristics to evaluate patient safety of medical devices. Journal of Biomedical Informatics, 36(1-2), 22-30.
  34. Keselman, A., Patel, V. L., Johnson, T., & Zhang, J. (2003). Institutional decision making to select patient care devices: identifying venues to promote patient safety. Journal of Biomedical Informatics, 36(1-2), 31-44.
  35. Brixey, J. J., Walji, M., Zhang, J., Johnson, T. R., & Turley, J. P. (2004). Proposing a Taxonomy and Model of Interruption. Proceedings of the 6th International Workshop on Enterprise Networking and Computing in Healthcare Industry (pp. 184-188). 
  36. Brixey, J.J, Turley, J. P., Zhang, J., & Johnson, T. R. (2004). Factors Influencing the Legibility of a Small Screen Medical Device Using Contextual Analysis. Proceedings of the XVIII Annual International Occupational Ergonomics and Safety Conference.
  37. Chung, P. H., Zhang, J., Johnson, T. R., & Patel, V. L. (2003). An extended hierarchical task analysis for error prediction in medical devices. Proc AMIA Symp, 165-169.
  38. Zhang, J., Patel, V. L., & Johnson, T. R. (2002). Medical error: is the solution medical or cognitive? J Am Med Inform Assoc, 9(6 Suppl), S75-77.
  39. Brixey, J., Johnson, T. R., & Zhang, J. (2002). Evaluating a medical error taxonomy. Proc AMIA Symp, 71-75.
  40. Wang, H., Johnson, T. R., Zhang, J., & Wang, Y. (2002). A study of object location memory. In W. Gray & C. Schunn (Eds.), Proceedings of the Twenty-Fourth Annual Conference of the Cognitive Science Society (pp. 920-925). Mahweh, NJ: Lawrence Erlbaum Associates.
  41. Johnson, T. R., Wang, H., Zhang, J., & Wang, Y. (2002). A model of spatio-temporal coding of memory for multidimensional stimuli. In W. Gray & C. Schunn (Eds.), Proceedings of the Twenty-Fourth Annual Conference of the Cognitive Science Society (pp. 506-511). Mahweh, NJ: Lawrence Erlbaum Associates.
  42. Turley, J. P., Johnson, C., Johnson, T., & Zhang, J. (2001). A clean slate: initiating a graduate program in health informatics. MD Computing, 18(1), 47-48.
  43. Wang, H., Johnson, T. R., & Zhang, J. (2001). The mind's view of space. Proceedings of the 3rd International Conference of Cognitive Science, 191-198.
  44. Zhang, J., Johnson, T. R., & Lu, G. (2001). The impact of representational formats on a dynamic decision making task. Proceedings of the 3rd International Conference of Cognitive Science, 212-219.
  45. Johnson, T. R., & Krems, J. F. (2001). Use of current explanations in multicausal abductive reasoning. Cognitive Science, 25, 903-939.
  46. Johnson, C., Johnson, T. R., & Zhang, J. (2000). Increasing Productivity and Reducing Errors through Usability Analysis: A Case Study and Recommendations. Proc AMIA Symp, 394-398.
  47. Wang, H., Zhang, J., & Johnson, T. R. (2000). Human belief revision and the order effect. In L. R. Gleitman & A. K. Joshi (Eds.), Proceedings of the Twenty-Second Annual Conference of the Cognitive Science Society (pp. 547-552). Mahweh, NJ: Lawrence Erlbaum Associates.
  48. Johnson, T. R., Wang, H., & Zhang, J. (2000). Declarative and Procedural Learning in Alphabetic Retrieval. In Proceedings of the Twenty Second Annual Meeting of the Cognitive Science Society (pp. 717-722). Mahweh, NJ: Lawrence Erlbaum Associates.
  49. Chuah, J., Zhang, J., & Johnson, T. R. (2000). The Representational Effect in Complex Systems: A Distributed Representation Approach. In L. R. Gleitman & A. K. Joshi (Eds.), Proceedings of the Twenty Second Annual Meeting of the Cognitive Science Society (pp. 633-638). Mahweh, NJ: Lawrence Erlbaum Associates.
  50. Johnson, T. R. (1998). A Comparison of Act-R and Soar. In U. Schmid, J. Krems & F. Wysotzki (Eds.), Mind modeling -- A cognitive science approach to reasoning, learning and discovery. Lengerich (Germany): Pabst Scientific Publishing.
  51. Chuah, J., Zhang, J., & Johnson, T. R. (1998). [Abstract] Distributed cognition of a navigational instrument display task. In M. A. Gernsbacher & S. J. Derry (Eds.), Proceedings of the Twentieth Annual Meeting of the Cognitive Science Society (pp. 1210). Hillsdale, NJ: Lawrence Erlbaum.
  52. Zhang, J., Johnson, T. R., & Wang, H. (1998). Order effects and frequency learning in tactical decision making. Thinking and Reasoning, 4(2), 123-145.
  53. Zhang, J., Johnson, T. R., & Wang, H. (1998). Isomorphic representations lead to the discovery of different forms of a common strategy with different degrees of generality. In M. A. Gernsbacher & S. J. Derry (Eds.), Proceedings of the Twentieth Annual Meeting of the Cognitive Science Society (pp. 1188-1193). Hillsdale, NJ: Lawrence Erlbaum.
  54. Wang, H., Johnson, T. R., & Zhang, J. (1998). UEcho: A model of uncertainty management in human abductive reasoning. In M. A. Gernsbacher & S. J. Derry (Eds.), Proceedings of the Twentieth Annual Meeting of the Cognitive Science Society (pp. 1113-1118). Hillsdale, NJ: Lawrence Erlbaum. [This paper won the 1998 Marr Prize for best student paper.]
  55. Johnson, T. R., Wang, H., & Zhang, J. (1998). Modeling speed-up and transfer of declarative and procedural knowledge. In M. A. Gernsbacher & S. J. Derry (Eds.), Proceedings of the Twentieth Annual Meeting of the Cognitive Science Society (pp. 531-536). Hillsdale, NJ: Lawrence Erlbaum.
  56. Johnson, T. R. (1998). Acquisition and transfer of declarative and procedural knowledge. In F. E. Ritter & R. M. Young (Eds.), Proceedings of the Second European Conference on Cognitive Modeling (pp. 15-22). Nottingham, UK: Nottingham University Press.
  57. Johnson, T. R. (1997). Control in ACT-R and Soar. Proceedings of the 19th Annual Meeting of the Cognitive Science Society, 343-348.
  58. Zhang, J., Johnson, T. R., & Wang, H. (1996). Order effects and frequency learning in belief updating. Proceedings  of the 18th Annual Conference of the Cognitive Science Society, 708-713.
  59. Johnson, T. R. (1996). Control  in Act-R and Soar. In Proceedings of the First European Workshop on Cognitive Modeling (pp. 201-208): Technische Universität Berlin.
  60. Johnson, T. R., & Zhang, J. (1995). A hybrid learning model of abductive reasoning. In R. Sun & F. Alexandre (Eds.), The Working Notes of THE IJCAI Workshop on Connectionist-symbolic Integration: From Unified to Hybrid Approaches (pp. 12-17).
  61. Smith, J. W., Jr., Bayazitoglu, A., Johnson, T. R., Johnson, K. A., & Amra, N. K. (1995). One framework, two systems: flexible abductive methods in the problem-space paradigm applied to antibody identification and biopsy interpretation. Artificial Intelligence in Medicine, 7, 201-225.
  62. Krems, J., & Johnson, T. R. (1995). Integration of anomalous data in multicausal explanations. In J. D. Moore & J. F. Lehman (Eds.), Proceedings of the Seventeenth Annual Conference of the Cognitive Science Society (pp. 277-282). Mahwah, NJ: Lawrence Erlbaum Assoc.
  63. Johnson, T. R., Zhang, J., & Wang, H. (1994). Bottom-up recognition learning: a compilation-based model of limited-lookahead learning. In A. Ram & K. Eiselt (Eds.), Proceedings of the Sixteenth Annual Conference of the Cognitive Science Society (pp. 469-474): Lawrence Erlbaum Associates.
  64. Johnson, T. R., Krems, J., & Amra, N. K. (1994). A computational model of human abductive skill and its acquisition. In A. Ram & K. Eiselt (Eds.), Proceedings of the Sixteenth Annual Conference of the Cognitive Science Society (pp. 463--468): Lawrence Erlbaum Associates.
  65. Smith, J. W., Steier, D., & Johnson, T. R. (1993). The Soar Architecture: Guest Editors' Introduction. IEEE Expert, 8(3), 13-14.
  66. Smith, J. W., & Johnson, T. R. (1993). A stratified approach to specifying, designing, and building knowledge systems. IEEE Expert, 8(3), 15-25.
  67. Bayazitoglu, A., Johnson, T. R., & Smith, J. W. (1993). Limitations of the unique-attribute representation for a learning system. In Proceedings of the Ninth IEEE Conference on Artificial Intelligence for Applications (pp. 219-225). Los Alamitos, California: IEEE Press.
  68. Amra, N. K., Smith, J. W., Johnson, K. A., & Johnson, T. R. (1992). An approach to evaluating heuristics in abduction: A case study using RedSoar—An abductive system for red blood cell antibody identification. In E. Bolger (Ed.), Proceedings of the Sixteenth Annual Symposium on Computer Applications in Medical Care (pp. 690-694). New York: McGraw-Hill.
  69. Bayazitoglu, A., Smith, J. W., & Johnson, T. R. (1992). A Diagnostic System That Learns From Experience. In E. Bolger (Ed.), Proceedings of the Sixteenth Annual Symposium on Computer Applications in Medical Care (pp. 685-689). New York: McGraw-Hill, Inc.
  70. Chandrasekaran, B., Johnson, T. R., & Smith, J. W. (1992). Task-structure analysis for knowledge modeling. Communications of the ACM, 35(9).
  71. Johnson, T. R., Smith, J. W., Johnson, K., Amra, N. K., & DeJongh, M. (1992). Diagrammatic Reasoning of Tabular Data. In Workshop on Reasoning with Diagrammatic Representations (pp. 164-167). Stanford.
  72. Johnson, K. A., Johnson, T. R., Smith, J. W., Jr., DeJongh, M., Fischer, O., Amra, N. K., & Bayazitoglu, A. (1991). RedSoar—A system for red blood cell antibody identification. In P. D. Clayton (Ed.), Proceedings of the Fifteenth Annual Symposium on Computer Applications in Medical Care (pp. 664--668). New York, NY: McGraw-Hill.
  73. Johnson, T. R., & Smith, J. W. (1991). A framework for opportunistic abductive strategies. In K. J. Hammond & D. Gentner (Eds.), Proceedings of the Thirteenth Annual Conference of the Cognitive Science Society (pp. 760--764). Hillsdale, NJ: Lawrence Erlbaum Associates.
  74. Amra, N., Johnson, K., Smith, J. W., & Johnson, T. R. (1991). Evaluation of RedSoar—An abductive system for red blood cell antibody identification.
  75. Bylander, T., Johnson, T. R., & Goel, A. (1991). Structured matching: A task-specific technique for making decisions. Knowledge Acquisition, 3(1), 1-20.
  76. Johnson, T. R., & Smith, J. W. (1990). A flexible technique for abduction. In Working notes of the AAAI-90 Spring Symposium on AI in Medicine (pp. 105-107).
  77. Johnson, T. R., Smith, J. W., & Bylander, T. (1989). HYPER—Hypothesis matching using compiled knowledge. In W. E. Hammond (Ed.), Proceedings of the AAMSI Congress 1989 (pp. 126-130). San Francisco, California: American Association for Medical Systems and Informatics.



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